dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00436
Location and strand information: 129 - 1277 (-)
Family: 3.D.4.3.2
Protein type: TC
Protein description: Cytochrome bd-I ubiquinol oxidase subunit 2

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00437
Location and strand information: 1418 - 2989 (-)
Family: 3.D.4.3.2
Protein type: TC
Protein description: Cytochrome bd-I ubiquinol oxidase subunit 1

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00438
Location and strand information: 3129 - 3704 (-)
Family: null
Protein type: null
Protein description: Ribonuclease HII

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00439
Location and strand information: 3821 - 4333 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00440
Location and strand information: 4618 - 5928 (-)
Family: CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.712
Protein molecular weight: 47310.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00441
Location and strand information: 5957 - 6205 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00442
Location and strand information: 6295 - 8763 (-)
Family: CBM13|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8632
Protein molecular weight: 91904.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00443
Location and strand information: 8791 - 10377 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.177
Protein molecular weight: 56973.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00444
Location and strand information: 10422 - 12128 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00445
Location and strand information: 12143 - 14224 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00446
Location and strand information: 14237 - 17476 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00447
Location and strand information: 17746 - 19257 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4674
Protein molecular weight: 54226.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00448
Location and strand information: 19415 - 23728 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00449
Location and strand information: 23844 - 24128 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00450
Location and strand information: 24125 - 24724 (+)
Family: 2.A.124.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00451
Location and strand information: 25075 - 25734 (+)
Family: TetR_N
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00452
Location and strand information: 25866 - 26876 (-)
Family: null
Protein type: null
Protein description: Aspartate-semialdehyde dehydrogenase

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00453
Location and strand information: 27028 - 29166 (+)
Family: 2.A.37.2.5
Protein type: TC
Protein description: Glutathione-regulated potassium-efflux system protein KefB

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00454
Location and strand information: 29166 - 29891 (+)
Family: null
Protein type: null
Protein description: tRNA threonylcarbamoyladenosine dehydratase

Gene clsuter ID: MGYG000000442_4|CGC1
Gene ID: MGYG000000442_00455
Location and strand information: 29888 - 30571 (+)
Family: 3.A.1.122.2
Protein type: TC
Protein description: Lipoprotein-releasing system ATP-binding protein LolD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000442_00440	CE8_e49
MGYG000000442_00442	GH95_e0\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000000442_00443	PL1_e64\|4.2.2.2	pectin
MGYG000000442_00447	PL1_e46

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000442_00436	Cytochrome bd-I ubiquinol oxidase subunit 2	TC	129	1277	-	3.D.4.3.2
MGYG000000442_00437	Cytochrome bd-I ubiquinol oxidase subunit 1	TC	1418	2989	-	3.D.4.3.2
MGYG000000442_00438	Ribonuclease HII	null	3129	3704	-	RNase_HII
MGYG000000442_00439	hypothetical protein	null	3821	4333	-	OMP_b-brl
MGYG000000442_00440	hypothetical protein	CAZyme	4618	5928	-	CE8
MGYG000000442_00441	hypothetical protein	null	5957	6205	+	No domain
MGYG000000442_00442	hypothetical protein	CAZyme	6295	8763	-	CBM13\| GH95
MGYG000000442_00443	hypothetical protein	CAZyme	8791	10377	-	PL1\| PL1_2
MGYG000000442_00444	hypothetical protein	null	10422	12128	-	DUF4957\| DUF5123
MGYG000000442_00445	hypothetical protein	null	12143	14224	-	SusD-like_3\| SusD_RagB
MGYG000000442_00446	TonB-dependent receptor SusC	TC	14237	17476	-	1.B.14.6.1
MGYG000000442_00447	hypothetical protein	CAZyme	17746	19257	-	PL1\| PL1_2
MGYG000000442_00448	Sensor histidine kinase RcsC	TF	19415	23728	-	HTH_AraC
MGYG000000442_00449	hypothetical protein	null	23844	24128	+	Lys_export
MGYG000000442_00450	hypothetical protein	TC	24125	24724	+	2.A.124.1.2
MGYG000000442_00451	hypothetical protein	STP	25075	25734	+	TetR_N
MGYG000000442_00452	Aspartate-semialdehyde dehydrogenase	null	25866	26876	-	Semialdhyde_dh\| Semialdhyde_dhC
MGYG000000442_00453	Glutathione-regulated potassium-efflux system protein KefB	TC	27028	29166	+	2.A.37.2.5
MGYG000000442_00454	tRNA threonylcarbamoyladenosine dehydratase	null	29166	29891	+	ThiF
MGYG000000442_00455	Lipoprotein-releasing system ATP-binding protein LolD	TC	29888	30571	+	3.A.1.122.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature